This book is a treatise on microbial ecology that covers traditional and cutting-edge issues in the ecology of microbes in the biosphere. It emphasizes on study tools, microbial taxonomy and the fundamentals of microbial activities and interactions within their communities and environment as well as on the related food web dynamics and biogeochemical cycling. The work exceeds the traditional domain of microbial ecology by revisiting the evolution of cellular prokaryotes and eukaryotes and stressing the general principles of ecology. The overview of the topics, authored by more than 80 specialists, is one of the broadest in the field of environmental microbiology. The overview of the topics, authored by more than 80 specialists, is one of the broadest in the field of environmental microbiology.

In this volume expert authors review current research on diverse aspects of the interactions which occur in the rhizosphere between the host plant and the microorganisms. The chapters focus on specific phenomena, from the biochemical and genetical level to complex inter-organism communication.

The interactions between the plant, soil and microbes are complex in nature. Events may be antagonistic, mutualistic or synergistic, depending upon the types of microorganisms and their association with the plant and soil in question. Multi-trophic tactics can therefore be employed to nourish plants in various habitats and growth conditions. Understanding the mechanisms of these interactions is thus highly desired in order to utilize the knowledge in an ecofriendly and sustainable way. This holistic approach to crop improvement may not only resolve the upcoming food security issues, but also make the environment greener by reducing the chemical inputs. Plant, soil and microbe, Volume 1: Implications in Crop Science, along with the forthcoming Volume 2: Mechanisms and Molecular Interactions, provide detailed accounts of the exquisite and delicate balance between the three critical components of agronomy. Specifically, these two titles focus on the basis of nutrient exchange between the microorganisms and the host plants, the mechanism of disease protection and the recent molecular details emerged from studying this multi-tropic interaction. Together they aim to provide a solid foundation for the students, teachers, and researchers interested in soil microbiology, plant pathology, ecology and agronomy.

Interactions between Non-Pathogenic Soil Microorganisms and Plants provides a comprehensive discussion of the non-pathogenic microorganisms associated with roots. It describes how a myriad of soil microorganisms affect plant growth, and how climatic and edaphic conditions contribute to the magnitude of microbial activity. The book is divided into 11 chapters that cover the plant-microorganism system; growth, structure, and physiology of roots; and nutrient uptake. It also explains the root exudates and exudation; energy flow in the plant; and rhizosphere. Legume symbiosis and root nodule symbioses in non-leguminous nitrogen fixing plants are also discussed. Moreover, the book explains the mycorrhizae and the impact of climatic and edaphic conditions on soil management and plant growth. The information that the book presents serves as a useful focal point for further studies on the interactions between plants and soil microorganisms. Thus, it provides an impetus for the development of agricultural practices that could improve food production, while mitigating anthropogenic pollution of agrosytems and waste of energy resources. Students, lecturers, and research workers in plant physiology and anatomy, microbiology, soil science, general ecology, and agronomy will find this book an invaluable reference for their learning and practice.

Recent years have seen tremendous progress in unraveling the molecular basis of different plant-microbe interactions. Knowledge has accumulated on the mecha nisms of the microbial infection of plants, which can lead to either disease or resistance. The mechanisms developed by plants to interact with microbes, whether viruses, bacteria, or fungi, involve events that can lead to symbiotic association or to disease or tumor formation. Cell death caused by pathogen infection has been of great interest for many years because of its association with plant resistance. There appear to be two types of plant cell death associated with pathogen infection, a rapid hypersensitive cell death localized at the site of infection during an incompatible interaction between a resistant plant and an avirulent pathogen, and a slow, normosensitive plant cell death that spreads beyond the site of infection during some compatible interactions involving a susceptible plant and a virulent, necrogenic pathogen. Plants possess a number of defense mechanisms against infection, such as (i) production of phytoalexin, (ii) formation of hydrolases, (iii) accumulation of hydroxyproline-rich glycoprotein and lignin deposition, (iv) production of pathogen-related proteins, (v) produc tion of oligosaccharides, jasmonic acid, and various other phenolic substances, and (vi) production of toxin-metabolizing enzymes. Based on these observations, insertion of a single suitable gene in a particular plant has yielded promising results in imparting resistance against specific infection or disease. It appears that a signal received after microbe infection triggers different signal transduction pathways.

Fungi belonging to the genera Trichoderma and Gliocladium are soil- bourne saprophytes which have been used for industrial and agricultural applications for decades. Some strains produce enzymes and antibiotics while others are useful as biological agents for the protection of plants against pathogens. This second volume of two describes the commercial uses of Trichoderma and Gliocladium, beginning with an in depth discussion of the degradation of polysaccharides and macromolecules by fungal enzymes. The application of the fungi in biocontrol for agricultural purposes is then examined. The final section of this volume deals with protein production and the utilisation of Trichoderma enzymes by various industries.

Beginning with the germ theory of disease in the 19th century and extending through most of the 20th century, microbes were believed to live their lives as solitary, unicellular, disease-causing organisms . This perception stemmed from the focus of most investigators on organisms that could be grown in the laboratory as cellular monocultures, often dispersed in liquid, and under ambient conditions of temperature, lighting, and humidity. Most such inquiries were designed to identify microbial pathogens by satisfying Koch's postulates.3 This pathogen-centric approach to the study of microorganisms produced a metaphorical "war" against these microbial invaders waged with antibiotic therapies, while simultaneously obscuring the dynamic relationships that exist among and between host organisms and their associated microorganisms-only a tiny fraction of which act as pathogens. Despite their obvious importance, very little is actually known about the processes and factors that influence the assembly, function, and stability of microbial communities. Gaining this knowledge will require a seismic shift away from the study of individual microbes in isolation to inquiries into the nature of diverse and often complex microbial communities, the forces that shape them, and their relationships with other communities and organisms, including their multicellular hosts. On March 6 and 7, 2012, the Institute of Medicine's (IOM's) Forum on Microbial Threats hosted a public workshop to explore the emerging science of the "social biology" of microbial communities. Workshop presentations and discussions embraced a wide spectrum of topics, experimental systems, and theoretical perspectives representative of the current, multifaceted exploration of the microbial frontier. Participants discussed ecological, evolutionary, and genetic factors contributing to the assembly, function, and stability of microbial communities; how microbial communities adapt and respond to environmental stimuli; theoretical and experimental approaches to advance this nascent field; and potential applications of knowledge gained from the study of microbial communities for the improvement of human, animal, plant, and ecosystem health and toward a deeper understanding of microbial diversity and evolution. The Social Biology of Microbial Communities: Workshop Summary further explains the happenings of the workshop.

The rapid expansion od industry and the excessive demands made on limited natural resources have caused genuine concern at all levels of society. In the past this concern has concentrated on plants and animals and their relationships with their environments, but now attention is also turning towards microorganisms whose role is crucial to so many natural processes - from global life and mineral cycles through to the production of beer and milk products. After a brief introduction to microbiology this book concentrates on the ecological aspects of microbial life covering a wide variety of topics including structure, behaviour, growth, dispersal, interactions and how microbes act as symbionts and pathogens. Such a wide-ranging interdisciplinary approach will appeal to undergraduate and graduate students of microbiology, plant and animal ecology, agronomy, forestry and environmental sciences. Professionals working in the same fields will also find it informative as will those working in plant pathology and soil, aquatic, medical and food microbiology.

The interactions between the plant, soil, and microbes are very complex in nature and may be antagonistic, mutualistic, or synergistic, depending upon the types of microorganisms and their association with the plant and soil. The multi-trophictactics are involved in these types of interactions to nourish the plants in various habitats and conditions. Understanding the mechanisms of these interactions is highly desired to utilize the knowledge in such an eco-friendly and sustainable way, which may not only resolve the upcoming food security issues but also make the environment green by reducing the chemical inputs. Plant, Soil and Microbes: Mechanisms and Molecular Interactions, along with the recently published Plant, Soil and Microbes: Implications in Crop Science, provide detailed accounts of the exquisite and delicate balance between the three critical components of agronomy. Specifically, these two titles focus on the basis of nutrient exchange between the microorganisms and the host plants, the mechanism of disease protection and the recent molecular details emerged from studying this multitropic interaction. Together they provide a solid foundation for the students, teachers, and researchers interested in soil microbiology, plant pathology, ecology and agronomy.