The current exponential growth in graph data has forced a shift to parallel computing for executing graph algorithms. Implementing parallel graph algorithms and achieving good parallel performance have proven difficult. This book addresses these challenges by exploiting the well-known duality between a canonical representation of graphs as abstract collections of vertices and edges and a sparse adjacency matrix representation. This linear algebraic approach is widely accessible to scientists and engineers who may not be formally trained in computer science. The authors show how to leverage existing parallel matrix computation techniques and the large amount of software infrastructure that exists for these computations to implement efficient and scalable parallel graph algorithms. The benefits of this approach are reduced algorithmic complexity, ease of implementation, and improved performance.

The study of graph structure has advanced in recent years with great strides: finite graphs can be described algebraically, enabling them to be constructed out of more basic elements. Separately the properties of graphs can be studied in a logical language called monadic second-order logic. In this book, these two features of graph structure are brought together for the first time in a presentation that unifies and synthesizes research over the last 25 years. The authors not only provide a thorough description of the theory, but also detail its applications, on the one hand to the construction of graph algorithms, and, on the other to the extension of formal language theory to finite graphs. Consequently the book will be of interest to graduate students and researchers in graph theory, finite model theory, formal language theory, and complexity theory.

Revised throughout Includes new chapters on the network simplex algorithm and a section on the five color theorem Recent developments are discussed

Algorithms are a dominant force in modern culture, and every indication is that they will become more pervasive, not less. The best algorithms are undergirded by beautiful mathematics. This text cuts across discipline boundaries to highlight some of the most famous and successful algorithms. Readers are exposed to the principles behind these examples and guided in assembling complex algorithms from simpler building blocks. Written in clear, instructive language within the constraints of mathematical rigor, Algorithms from THE BOOK includes a large number of classroom-tested exercises at the end of each chapter. The appendices cover background material often omitted from undergraduate courses. Most of the algorithm descriptions are accompanied by Julia code, an ideal language for scientific computing. This code is immediately available for experimentation. Algorithms from THE BOOK is aimed at first-year graduate and advanced undergraduate students. It will also serve as a convenient reference for professionals throughout the mathematical sciences, physical sciences, engineering, and the quantitative sectors of the biological and social sciences.

When reality is modeled by computation, matrices are often the connection between the continuous physical world and the finite algorithmic one. Usually, the more detailed the model, the bigger the matrix, the better the answer, however, efficiency demands that every possible advantage be exploited. The articles in this volume are based on recent research on sparse matrix computations. This volume looks at graph theory as it connects to linear algebra, parallel computing, data structures, geometry, and both numerical and discrete algorithms. The articles are grouped into three general categories: graph models of symmetric matrices and factorizations, graph models of algorithms on nonsymmetric matrices, and parallel sparse matrix algorithms. This book will be a resource for the researcher or advanced student of either graphs or sparse matrices; it will be useful to mathematicians, numerical analysts and theoretical computer scientists alike.

This volume contains a collection of clever mathematical applications of linear algebra, mainly in combinatorics, geometry, and algorithms. Each chapter covers a single main result with motivation and full proof in at most ten pages and can be read independently of all other chapters (with minor exceptions), assuming only a modest background in linear algebra. The topics include a number of well-known mathematical gems, such as Hamming codes, the matrix-tree theorem, the Lovasz bound on the Shannon capacity, and a counterexample to Borsuk's conjecture, as well as other, perhaps less popular but similarly beautiful results, e.g., fast associativity testing, a lemma of Steinitz on ordering vectors, a monotonicity result for integer partitions, or a bound for set pairs via exterior products. The simpler results in the first part of the book provide ample material to liven up an undergraduate course of linear algebra. The more advanced parts can be used for a graduate course of linear-algebraic methods or for seminar presentations. Table of Contents: Fibonacci numbers, quickly; Fibonacci numbers, the formula; The clubs of Oddtown; Same-size intersections; Error-correcting codes; Odd distances; Are these distances Euclidean?; Packing complete bipartite graphs; Equiangular lines; Where is the triangle?; Checking matrix multiplication; Tiling a rectangle by squares; Three Petersens are not enough; Petersen, Hoffman-Singleton, and maybe 57; Only two distances; Covering a cube minus one vertex; Medium-size intersection is hard to avoid; On the difficulty of reducing the diameter; The end of the small coins; Walking in the yard; Counting spanning trees; In how many ways can a man tile a board?; More bricks--more walls?; Perfect matchings and determinants; Turning a ladder over a finite field; Counting compositions; Is it associative?; The secret agent and umbrella; Shannon capacity of the union: a tale of two fields; Equilateral sets; Cutting cheaply using eigenvectors; Rotating the cube; Set pairs and exterior products; Index. (STML/53)

Discover how graph algorithms can help you leverage the relationships within your data to develop more intelligent solutions and enhance your machine learning models. You’ll learn how graph analytics are uniquely suited to unfold complex structures and reveal difficult-to-find patterns lurking in your data. Whether you are trying to build dynamic network models or forecast real-world behavior, this book illustrates how graph algorithms deliver value—from finding vulnerabilities and bottlenecks to detecting communities and improving machine learning predictions. This practical book walks you through hands-on examples of how to use graph algorithms in Apache Spark and Neo4j—two of the most common choices for graph analytics. Also included: sample code and tips for over 20 practical graph algorithms that cover optimal pathfinding, importance through centrality, and community detection. Learn how graph analytics vary from conventional statistical analysis Understand how classic graph algorithms work, and how they are applied Get guidance on which algorithms to use for different types of questions Explore algorithm examples with working code and sample datasets from Spark and Neo4j See how connected feature extraction can increase machine learning accuracy and precision Walk through creating an ML workflow for link prediction combining Neo4j and Spark

This new edition illustrates the power of linear algebra in the study of graphs. The emphasis on matrix techniques is greater than in other texts on algebraic graph theory. Important matrices associated with graphs (for example, incidence, adjacency and Laplacian matrices) are treated in detail. Presenting a useful overview of selected topics in algebraic graph theory, early chapters of the text focus on regular graphs, algebraic connectivity, the distance matrix of a tree, and its generalized version for arbitrary graphs, known as the resistance matrix. Coverage of later topics include Laplacian eigenvalues of threshold graphs, the positive definite completion problem and matrix games based on a graph. Such an extensive coverage of the subject area provides a welcome prompt for further exploration. The inclusion of exercises enables practical learning throughout the book. In the new edition, a new chapter is added on the line graph of a tree, while some results in Chapter 6 on Perron-Frobenius theory are reorganized. Whilst this book will be invaluable to students and researchers in graph theory and combinatorial matrix theory, it will also benefit readers in the sciences and engineering.

The sparse backslash book. Everything you wanted to know but never dared to ask about modern direct linear solvers. Chen Greif, Assistant Professor, Department of Computer Science, University of British Columbia.Overall, the book is magnificent. It fills a long-felt need for an accessible textbook on modern sparse direct methods. Its choice of scope is excellent John Gilbert, Professor, Department of Computer Science, University of California, Santa Barbara.Computational scientists often encounter problems requiring the solution of sparse systems of linear equations. Attacking these problems efficiently requires an in-depth knowledge of the underlying theory, algorithms, and data structures found in sparse matrix software libraries. Here, Davis presents the fundamentals of sparse matrix algorithms to provide the requisite background. The book includes CSparse, a concise downloadable sparse matrix package that illustrates the algorithms and theorems presented in the book and equips readers with the tools necessary to understand larger and more complex software packages.With a strong emphasis on MATLAB and the C programming language, Direct Methods for Sparse Linear Systems equips readers with the working knowledge required to use sparse solver packages and write code to interface applications to those packages. The book also explains how MATLAB performs its sparse matrix computations.Audience This invaluable book is essential to computational scientists and software developers who want to understand the theory and algorithms behind modern techniques used to solve large sparse linear systems. The book also serves as an excellent practical resource for students with an interest in combinatorial scientific computing.Preface; Chapter 1: Introduction; Chapter 2: Basic algorithms; Chapter 3: Solving triangular systems; Chapter 4: Cholesky factorization; Chapter 5: Orthogonal methods; Chapter 6: LU factorization; Chapter 7: Fill-reducing orderings; Chapter 8: Solving sparse linear systems; Chapter 9: CSparse; Chapter 10: Sparse matrices in MATLAB; Appendix: Basics of the C programming language; Bibliography; Index.

This clearly structured textbook/reference presents a detailed and comprehensive review of the fundamental principles of sequential graph algorithms, approaches for NP-hard graph problems, and approximation algorithms and heuristics for such problems. The work also provides a comparative analysis of sequential, parallel and distributed graph algorithms – including algorithms for big data – and an investigation into the conversion principles between the three algorithmic methods. Topics and features: presents a comprehensive analysis of sequential graph algorithms; offers a unifying view by examining the same graph problem from each of the three paradigms of sequential, parallel and distributed algorithms; describes methods for the conversion between sequential, parallel and distributed graph algorithms; surveys methods for the analysis of large graphs and complex network applications; includes full implementation details for the problems presented throughout the text; provides additional supporting material at an accompanying website. This practical guide to the design and analysis of graph algorithms is ideal for advanced and graduate students of computer science, electrical and electronic engineering, and bioinformatics. The material covered will also be of value to any researcher familiar with the basics of discrete mathematics, graph theory and algorithms.