This new book presents the latest research in environmental microbiology which is area of interaction that studies the interaction of microorganisms with the environment. It includes the structure, activities and communal behaviour of microbial communities, microbial interactions and interactions with plants, animals and non-living environmental factors, population biology and clonal structure microbes and surfaces, adhesion and biofouling responses to environmental signals and stress factors growth and survival, modelling and theory development, microbial community genetics and evolutionary processes, microbial physiological, metabolic and structural diversity, pollution microbiology, extremophiles and life in extreme and unusual little-explored habitats, primary and secondary production, element cycles and biogeochemical processes and microbially-influenced global changes.

This book contains a compilation of papers presented at the II International Conference on Environmental, Industrial and Applied Microbiology (BioMicroWorld2007) held in Seville, Spain on 28 November - 1 December 2007, where over 550 researchers from about 60 countries attended and presented their cutting-edge research. The main goals of this book are to: (1) identify new approaches and research opportunities in applied microbiology, presenting works that link microbiology with research areas usually related to other scientific and engineering disciplines; and (2) communicate current research priorities and progress in the field. The contents of this book mirror this focus.Microbiologists interested in environmental, industrial and applied microbiology and, in general, scientists whose research fields are related to applied microbiology can find an overview of the current state of the art in the topic. In addition to the more general topic, some chapters are devoted to specific branches of microbiology research, such as bioremediation; biosurfactants; microbial factories; biotechnologically relevant enzymes and proteins; microbial physiology, metabolism and gene expression; and future bioindustries.

This book presents a comprehensive collection of articles illustrating the importance of microbial community structure and function for ecosystem sustainability and environmental reclamation. It addresses a diverse range of topics, including microbial diversity, physiology, genomics, ecosystem function, interaction, metabolism, and the fruitful use of microbial communities for crop productivity and environmental remediation. In addition, the book explores issues ranging from general concepts on the diversity of microorganisms in soil, and ecosystem function to the evolution and taxonomy of soil microbiota, with future prospects. It covers cutting-edge methods in soil microbial ecological studies, rhizosphere microflora, the role of organic matter in plant productivity, biological nitrogen fixation and its genetics, microbial transformation of plant nutrients in soil, plant-growth-promoting rhizobacteria, and organic matter transformation. The book also discusses the application of microbes in biodegradation of xenobiotic contaminants. It covers bio-fertilizers and their role in sustainable agriculture and soil health, biological control of insect pests and plant pathogens, and the latest tools of omics in soil microbiology, i.e. genomics, proteomics, transcriptomics and metabolomics, which offer pioneering approaches to the exploration of microbial structure and function.

This book provides an overview of ecological aspects of the metabolism and behavior of microbes, microbial habitats, biogeochemical cycles, and biotechnology. It was designed by selecting relevant chapters from the comprehensive Encyclopedia of Microbiology, 3rd edn., and inviting the original authors to update their material to include key developments and advances in the field.

This book focuses on the importance and roles of seed microbiomes in sustainable agriculture by exploring the diversity of microbes vectored on and within seeds of both cultivated and non-cultivated plants. It provides essential insights into how seeds can be adapted to enhance microbiome vectoring, how damaged seed microbiomes can be assembled again and how seed microbiomes can be conserved. Plant seeds carry not only embryos and nutrients to fuel early seedling growth, but also microbes that modulate development, soil nutrient acquisition, and defense against pathogens and other stressors. Many of these microbes (bacteria and fungi) become endophytic, entering into the tissues of plants, and typically exist within plants without inducing negative effects. Although they have been reported in all plants examined to date, the extent to which plants rely on seed vectored microbiomes to enhance seedling competitiveness and survival is largely unappreciated. How microbes function to increase the fitness of seedlings is also little understood. The book is a unique and important resource for researchers and students in microbial ecology and biotechnology. Further, it appeals to applied academic and industrial agriculturists interested in increasing crop health and yield.

This book places the main actors in environmental microbiology, namely the microorganisms, on center stage. Using the modern approach of 16S ribosomal RNA, the book looks at the taxonomy of marine and freshwater bacteria, fungi, protozoa, algae, viruses, and the smaller aquatic animals such as nematodes and rotifers, as well as at the study of unculturable aquatic microorganisms (metagenomics). The peculiarities of water as an environment for microbial growth, and the influence of aquatic microorganisms on global climate and global recycling of nitrogen and sulphur are also examined. The pollution of water is explored in the context of self-purification of natural waters. Modern municipal water purification and disease transmission through water are discussed. Alternative methods for solid waste disposal are related to the economic capability of a society. Viruses are given special attention. By focusing on the basics, this primer will appeal across a wide range of disciplines.

This book enables engineering students to understand how microbiology can be applied to environmental research and practical applications. Written specifically for senior undergraduate to graduate level civil and environmental engineering students, the textbook encompasses both fundamental and applied principles and covers topics such as the microbiology of water, wastewater, soil, and air biotreatment systems used in environmental engineering. It also covers civil engineering topics such as biocementation, biocorrosion, biofouling and biodeterioration of materials. Suitable for environmental engineers with little to no biology training, this book provides a thoroughly up-to-date introduction to current trends in environmental microbiology and engineering. Microbial classification is represented as a periodic table with theoretical connections between all prokaryotic groups and highlighting their environmental applications. The textbook includes quizzes for each chapter, tutorials and exam questions. A separate solutions manual is available with qualifying course adoption. Combining microbiological knowledge and environmental biotechnology principles in a readable fashion, the book includes topics such as Structures and functions of microbial cell and cell aggregates Applied microbial genetics and molecular biology Diversity and function of microorganisms in environmental engineering systems Environmental bioengineering processes Microbiological monitoring of environmental engineering systems Microbiology of water and wastewater treatment Biocementation and bioc1ogging of soil Biocorrosion of constructions Biodeterioration of materials Biopollution of indoor environment Bioremediation and biotransformation of solid waste and soil Ancillary Instructional Material: Quiz and Exam Bank As an instructor and an active participant in the environmental and civil engineering community, the author has recognized the need for field-specific microbiology instructional material, and has constructed a concise, relevant text for both students and professionals.

The development of civilization entails the need to find new technological solutions leading to products with new properties. Allies in these efforts are microorganisms that have developed skills to synthesize products with properties of interest to the industry, environmental remediation or water treatment. The evolution of the omics approaches brought new tools to explore the microbial diversity and microorganisms' potential. These new methodological approaches are readily used in both industrial and environmental microbiology. This Special Issue collects research papers as well as review articles addressing recent advances on applied and environmental microbiology. The review articles critically discuss the importance of biopolymers, specifically xanthan gum, to improve soil properties and the importance that microorganisms of poorly explored environments, such as caves, may have in the production of new bioactive compounds. The microbiological aspects of wastewater treatment and occurrence of antibiotic resistance genes in wastewater and sludge are studied in two research papers. These works demonstrate the effect that treatment conditions may have in the modulation of the water bacterial communities and how treated wastewater may impact the receiving environment in terms of pollution with antibiotic resistance genes. Additionally, the influence that an invasive species (alligator weed) may have on wetlands organic matter accumulation and bacterial communities was studied, being demonstrated that the presence of the invasive weed affects the wetland microhabitat both in terms of organic matter content and bacterial communities structure.

This book provides a broad account of various applied aspects of microbiology for quality and safety evaluations in food, water, soil, environment and pharmaceutical sciences. The work is timely, as the safety and quality of various commodities such as water and wastewater, food, pharmaceutical medications and medical devices are of paramount concern in developing countries globally for improved public health quality in areas ranging from food security to disease exposure. The book offers an introduction to basic concepts of biosafety and related microbiological practices and applies these methodologies to a multitude of disciplines in subject-focused chapters. Each chapter offers experiments and exercises pertaining to the specific area of interest in microbiological research, which will allow readers to apply the knowledge gained in a laboratory or classroom setting to see the microbiological methods discussed in practice. The book will be useful for industrialists, researchers, academics and undergraduate/graduate students of microbiology, biotechnology, botany and pharmaceutical sciences. The text aims to be a significant contribution in effectively guiding scientists, analysts, lab technicians and quality managers working with microbiology in industrial and commercial fields.

The integrity of knowledge that emerges from research is based on individual and collective adherence to core values of objectivity, honesty, openness, fairness, accountability, and stewardship. Integrity in science means that the organizations in which research is conducted encourage those involved to exemplify these values in every step of the research process. Understanding the dynamics that support â€" or distort â€" practices that uphold the integrity of research by all participants ensures that the research enterprise advances knowledge. The 1992 report Responsible Science: Ensuring the Integrity of the Research Process evaluated issues related to scientific responsibility and the conduct of research. It provided a valuable service in describing and analyzing a very complicated set of issues, and has served as a crucial basis for thinking about research integrity for more than two decades. However, as experience has accumulated with various forms of research misconduct, detrimental research practices, and other forms of misconduct, as subsequent empirical research has revealed more about the nature of scientific misconduct, and because technological and social changes have altered the environment in which science is conducted, it is clear that the framework established more than two decades ago needs to be updated. Responsible Science served as a valuable benchmark to set the context for this most recent analysis and to help guide the committee's thought process. Fostering Integrity in Research identifies best practices in research and recommends practical options for discouraging and addressing research misconduct and detrimental research practices.