Plants and animals have evolved ever since their appearance in a largely microbial world. Their own cells are less numerous than the microorganisms that they host and with whom they interact closely. The study of these interactions, termed microbial symbioses, has benefited from the development of new conceptual and technical tools. We are gaining an increasing understanding of the functioning, evolution and central importance of symbiosis in the biosphere. Since the origin of eukaryotic cells, microscopic organisms of our planet have integrated our very existence into their ways of life. The interaction between host and symbiont brings into question the notion of the individual and the traditional representation of the evolution of species, and the manipulation of symbioses facilitates fascinating new perspectives in biotechnology and health. Recent discoveries show that association is one of the main properties of organisms, making a more integrated view of biology necessary. Microbial Symbioses provides a deliberately "symbiocentric outlook, to exhibit how the exploration of microbial symbioses enriches our understanding of life, and the potential future for this discipline. - Offers a concise summary of the most recent discoveries in the field - Shows how symbiosis is acquiring a central role in the biology of the 21st century by transforming our understanding of living things - Presents scientific issues, but also societal and economic related issues (biodiversity, biotechnology) through examples from all branches of the tree of life

The papers in the "Hydrothermal Vent" e-book cover a range of microbiological research in deep and shallow hydrothermal environments, from high temperature “black smokers,” to diffuse flow habitats and episodically discharging subsurface fluids, to the hydrothermal plumes. Together they provide a snapshot of current research interests in a field that has evolved rapidly since the discovery of hydrothermal vents in 1977. Hydrothermally influenced microbial habitats and communities represent a wide spectrum of geological setting, chemical in-situ regimes, and biotic communities; the classical examples of basalt-hosted black smoker chimneys at active mid-ocean spreading centers have been augmented by hydrothermally heated and chemically altered sediments, microbiota fueled by serpentinization reactions, and low-temperature vents with unusual menus of electron donors. Environmental gradients and niches provide habitats for unusual or unprecedented microorganisms and microbial ecosystems. The discovery of novel extremophiles underscores untapped microbial diversity in hydrothermal vent microbial communities. Different stages of hydrothermal activity, from early onset to peak activity, gradual decline, and persistence of cold and fossil vent sites, correspond to different colonization waves by microorganisms as well as megafauna. Perhaps no other field in microbiology is so intertwined with the geological and geochemical evolution of the oceans, and promises so many biochemical and physiological discoveries still to be made within the unexhausted richness of extreme microbial life.

Teeming with weird and wonderful life--giant clams and mussels, tubeworms, "eyeless" shrimp, and bacteria that survive on sulfur--deep-sea hot-water springs are found along rifts where sea-floor spreading occurs. The theory of plate tectonics predicted the existence of these hydrothermal vents, but they were discovered only in 1977. Since then the sites have attracted teams of scientists seeking to understand how life can thrive in what would seem to be intolerable or extreme conditions of temperature and fluid chemistry. Some suspect that these vents even hold the key to understanding the very origins of life. Here a leading expert provides the first authoritative and comprehensive account of this research in a book intended for students, professionals, and general readers. Cindy Lee Van Dover, an ecologist, brings nearly two decades of experience and a lively writing style to the text, which is further enhanced by two hundred illustrations, including photographs of vent communities taken in situ. The book begins by explaining what is known about hydrothermal systems in terms of their deep-sea environment and their geological and chemical makeup. The coverage of microbial ecology includes a chapter on symbiosis. Symbiotic relationships are further developed in a section on physiological ecology, which includes discussions of adaptations to sulfide, thermal tolerances, and sensory adaptations. Separate chapters are devoted to trophic relationships and reproductive ecology. A chapter on community dynamics reveals what has been learned about the ways in which vent communities become established and why they persist, while a chapter on evolution and biogeography examines patterns of species diversity and evolutionary relationships within chemosynthetic ecosystems. Cognate communities such as seeps and whale skeletons come under scrutiny for their ability to support microbial and invertebrate communities that are ecologically and evolutionarily related to hydrothermal faunas. The book concludes by exploring the possibility that life originated at hydrothermal vents, a hypothesis that has had tremendous impact on our ideas about the potential for life on other planets or planetary bodies in our solar system.

The Microbiology of Deep-Sea Hydrothermal Vents is the first comprehensive treatment of the microbiology of these unusual deep-sea ecosystems. It includes information on microbial biodiversity, ecology, physiology, and the origin of life. It is the first volume available on the subject. All chapters are written by leaders in their respective fields who have made substantial contributions to the current understanding of these novel deep-sea habitats. Much of the book's material is entirely new and forward looking. Individual chapters examine the geologic setting and chemistry of deep-sea hydrothermal vents, growth at high temperatures, microbe-metal interactions and mineral deposition, stable isotopes, and more. This reference presents a unique interdisciplinary approach to the study of hydrothermal vents. Because of its thorough coverage of the subject, the book will continue to be a valuable resource for researchers in this field for the next decade.

During the past ten years, evidence has developed to indicate that seawater convects through oceanic crust driven by heat derived from creation of lithosphere at the Earth-encircling oceanic ridge-rift system of seafloor spreading centers. This has stimulated multiple lines of research with profound implications for the earth and life sciences. The lines of research comprise the role of hydrothermal convection at seafloor spreading centers in the Earth's thermal regime by cooling of newly formed litho sphere (oceanic crust and upper mantle); in global geochemical cycles and mass balances of certain elements by chemical exchange between circulating seawater and basaltic rocks of oceanic crust; in the concentration of metallic mineral deposits by ore-forming processes; and in adaptation of biological communities based on a previously unrecognized form of chemosynthesis. The first work shop devoted to interdisciplinary consideration of this field was organized by a committee consisting of the co-editors of this volume under the auspices of a NATO Advanced Research Institute (ARI) held 5-8 April 1982 at the Department of Earth Sciences of Cambridge University in England. This volume is a product of that workshop. The papers were written by members of a pioneering research community of marine geologists, geophysicists, geochemists and biologists whose work is at the stage of initial description and interpretation of hydrothermal and associated phenomena at seafloor spreading centers.

This volume discusses environmental issues associated with deep-sea mining, with an emphasis on potential impacts, their consequences and the policy perspectives. The book describes the methods and technologies to assess, monitor and mitigate mining impacts on marine environments, and also suggests various approaches for environmental management when conducting deep-sea mining. The volume brings together information and data for researchers, contractors, mining companies, regulators, and NGOs working in the field of deep-sea mining. Section 1 highlights the various environmental issues and discusses methods and approaches that can help in developing environmentally sustainable deep-sea mining. Section 2 details the results and outcomes of studies related to impact assessment of deep-sea mining, and proposes methods for monitoring. Section 3 discusses the need and means for developing data standards and their application to deep-sea mining. Section 4 discusses the policies, approaches, and practices related to deep-sea mining, suggests formats for developing environmental impact statements (EIS) and environmental management plans (EMP), and describes national and international regulations for environmental management. Section 5 concludes the text by putting deep-sea economic activities into an environmental context and conducting techno-economic analyses of deep-sea mining and processing.

Dr. Joshua Lederberg - scientist, Nobel laureate, visionary thinker, and friend of the Forum on Microbial Threats - died on February 2, 2008. It was in his honor that the Institute of Medicine's Forum on Microbial Threats convened a public workshop on May 20-21, 2008, to examine Dr. Lederberg's scientific and policy contributions to the marketplace of ideas in the life sciences, medicine, and public policy. The resulting workshop summary, Microbial Evolution and Co-Adaptation, demonstrates the extent to which conceptual and technological developments have, within a few short years, advanced our collective understanding of the microbiome, microbial genetics, microbial communities, and microbe-host-environment interactions.

This book is the comprehensive volume of the TAIGA (“a great river ” in Japanese) project. Supported by the Japanese government, the project examined the hypothesis that the subseafloor fluid advection system (subseafloor TAIGA) can be categorized into four types, TAIGAs of sulfur, hydrogen, carbon (methane), and iron, according to the most dominant reducing substance, and the chemolithoautotrophic bacteria/archaea that are inextricably associated with respective types of TAIGAs which are strongly affected by their geological background such as surrounding host rocks and tectonic settings. Sub-seafloor ecosystems are sustained by hydrothermal circulation or TAIGA that carry chemical energy to the chemosynthetic microbes living in an extreme environment. The results of the project have been summarized comprehensively in 50 chapters, and this book provides an overall introduction and relevant topics on the mid-ocean ridge system of the Indian Ocean and on the arc-backarc systems of the Southern Mariana Trough and Okinawa Trough.

Beginning with the germ theory of disease in the 19th century and extending through most of the 20th century, microbes were believed to live their lives as solitary, unicellular, disease-causing organisms . This perception stemmed from the focus of most investigators on organisms that could be grown in the laboratory as cellular monocultures, often dispersed in liquid, and under ambient conditions of temperature, lighting, and humidity. Most such inquiries were designed to identify microbial pathogens by satisfying Koch's postulates.3 This pathogen-centric approach to the study of microorganisms produced a metaphorical "war" against these microbial invaders waged with antibiotic therapies, while simultaneously obscuring the dynamic relationships that exist among and between host organisms and their associated microorganisms-only a tiny fraction of which act as pathogens. Despite their obvious importance, very little is actually known about the processes and factors that influence the assembly, function, and stability of microbial communities. Gaining this knowledge will require a seismic shift away from the study of individual microbes in isolation to inquiries into the nature of diverse and often complex microbial communities, the forces that shape them, and their relationships with other communities and organisms, including their multicellular hosts. On March 6 and 7, 2012, the Institute of Medicine's (IOM's) Forum on Microbial Threats hosted a public workshop to explore the emerging science of the "social biology" of microbial communities. Workshop presentations and discussions embraced a wide spectrum of topics, experimental systems, and theoretical perspectives representative of the current, multifaceted exploration of the microbial frontier. Participants discussed ecological, evolutionary, and genetic factors contributing to the assembly, function, and stability of microbial communities; how microbial communities adapt and respond to environmental stimuli; theoretical and experimental approaches to advance this nascent field; and potential applications of knowledge gained from the study of microbial communities for the improvement of human, animal, plant, and ecosystem health and toward a deeper understanding of microbial diversity and evolution. The Social Biology of Microbial Communities: Workshop Summary further explains the happenings of the workshop.

The World Ocean Assessment - or, to give its full title, The First Global Integrated Marine Assessment - is the outcome of the first cycle of the United Nations' Regular Process for Global Reporting and Assessment of the State of the Marine Environment, including Socioeconomic Aspects. The Assessment provides vital, scientifically-grounded bases for the consideration of ocean issues, including climate change, by governments, intergovernmental agencies, non-governmental agencies and all other stakeholders and policymakers involved in ocean affairs. Together with future assessments and related initiatives, it will support the implementation of the recently adopted 2030 Agenda for Sustainable Development, particularly its ocean-related goals. Moreover, it will also form an important reference text for marine science courses.